Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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scatter-valuefrom-wf6.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/scatter-valuefrom-wf6.cwl Branch/Commit ID: master |
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star-stringtie_wf_pe.cwl
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https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/star-stringtie/paired_end/star-stringtie_wf_pe.cwl Branch/Commit ID: master |
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Unaligned to aligned BAM
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https://github.com/markrobbo/workflows.git
Path: workflows/hello/exome_alignment_packed.cwl Branch/Commit ID: master Packed ID: align.cwl |
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qiime2 identify differentially abundant features
Differential abundance testing with ANCOM from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-09-ancom.cwl |
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realign-distr.cwl
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https://github.com/sentieon/sentieon-cwl.git
Path: stage/realign-distr.cwl Branch/Commit ID: master |
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hello_world_checker.cwl
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https://github.com/dockstore/hello_world.git
Path: hello_world_checker.cwl Branch/Commit ID: 1.0.1 |
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CODEX analysis pipeline using Cytokit
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https://github.com/hubmapconsortium/codex-pipeline.git
Path: steps/ometiff_second_stitching.cwl Branch/Commit ID: cf68e50 |
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qc_aggregator
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https://github.com/msk-access/qc_generation.git
Path: aggregate_visualize__packed.cwl Branch/Commit ID: develop Packed ID: qc_aggregator.cwl |
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group-isoforms-batch.cwl
Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored. |
https://github.com/Barski-lab/workflows.git
Path: tools/group-isoforms-batch.cwl Branch/Commit ID: master |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: master |
