Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580
	811.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/811.cwl Branch/Commit ID: 8949fc2d68efe128ce841739d1190645dbd233bb
	group-isoforms-batch.cwl Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.	https://github.com/Barski-lab/workflows.git Path: tools/group-isoforms-batch.cwl Branch/Commit ID: ea2a2ab57710fcf067f67305f3dd6ad29094da1a
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3
	mut3.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/mut3.cwl Branch/Commit ID: fc6ca8b1498926f705dcfde7ab0a365bd09a9675
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295
	xenbase-rnaseq-se.cwl XenBase workflow for analysing RNA-Seq single-end data	https://github.com/Barski-lab/workflows.git Path: workflows/xenbase-rnaseq-se.cwl Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf
	trim-rnaseq-se-dutp.cwl Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-se-dutp.cwl Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf
	split-directions.cwl	https://git.astron.nl/RD/VLBI-cwl.git Path: workflows/split-directions.cwl Branch/Commit ID: 86441858fc31364cfa9d3da6a653c155591126dd
	Salmon quantification, FASTQ -> H5AD count matrix	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: steps/salmon-quantification.cwl Branch/Commit ID: 0e042776c8446115e70144fae5497465a5ff1e7e