Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome.cwl Branch/Commit ID: f21b6c6f70f01d0fe08193684060161107f0bf59
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: d39017c63dd8e088f1ad3809d709529df602e05f
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: ec45fad68ca10fb64d5c58e704991b146dc31d28
	Downsample and HaplotypeCaller	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	sec-wf-out.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: 0db44e3c9805a070564f954222efff71cd791b70
	Cell Ranger Count (RNA) Cell Ranger Count (RNA) Quantifies single-cell gene expression of the sequencing data from a single 10x Genomics library. The results of this workflow are primarily used in either “Single-Cell RNA-Seq Filtering Analysis” or “Cell Ranger Aggregate (RNA, RNA+VDJ)” pipelines.	https://github.com/datirium/workflows.git Path: workflows/single-cell-preprocess-cellranger.cwl Branch/Commit ID: b4d578c2ba4713a5a22163d9f8c7105acda1f22e
	scatter-valuefrom-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf4.cwl Branch/Commit ID: 203797516329f7fb8aa5e763e6f9b331c63c3060 Packed ID: main
	scatter-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: bf93dd3e6e3261e1455530984ce045f283535d17
	mut3.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/mut3.cwl Branch/Commit ID: 1eb6bfe3c77aebaf69453a669d21ae7a5a78056f
	search.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/search.cwl Branch/Commit ID: 46b7f9766d1bc8a4871474eee25ec730b4e173da Packed ID: main