Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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04-peakcall-se.cwl
ATAC-seq 04 quantification - SE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl Branch/Commit ID: master |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: dev |
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oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: 1.0.0 |
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wf-alignment.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: giab-chm/giab-chm-workflow/wf-alignment.cwl Branch/Commit ID: master |
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CRAM_md5sum_checker_wrapper.cwl
This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results |
https://github.com/DataBiosphere/topmed-workflows.git
Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl Branch/Commit ID: 1.19.0 |
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wf-svcall.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: NA24385-sv/NA24385-sv-workflow/wf-svcall.cwl Branch/Commit ID: master |
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wf.cwl
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https://github.com/MarkRobbo/subworkflow-test.git
Path: NF_Hello/wf.cwl Branch/Commit ID: master |
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01-qc-pe.cwl
ChIP-seq 01 QC - reads: PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/01-qc-pe.cwl Branch/Commit ID: master |
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sidearm.cwl
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https://github.com/NCBI-Hackathons/Virus_Detection_SRA.git
Path: cwl/tools/sidearm.cwl Branch/Commit ID: master |
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wgs alignment with qc
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: low-vaf |
