Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Prepare user input

Prepare user input for NCBI-PGAP pipeline

 https://github.com/ncbi/pgap.git

Path: prepare_user_input2.cwl

Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf
workflow graph Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass2.cwl

Branch/Commit ID: 933a0b7554e4ae76a86d25c76b408b5dfc8ed1e3
workflow graph gsmcal.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target/gsmcal.cwl

Branch/Commit ID: 1e91001f761abbddeb2c9f4528ed4cec41d113f3
workflow graph ValidateTriggerPerformance

Compare trigger performance between simulations and data.

 https://github.com/gammasim/workflows.git

Path: workflows/ValidateTriggerPerformance.cwl

Branch/Commit ID: e0525b01ebee3ac1b4f0128a0002c6543a5918cf
workflow graph workflow_input_sf_expr_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_sf_expr_v1_1.cwl

Branch/Commit ID: 4a8390d897913c3776a0d2b2a01e1e6134b968bc
workflow graph default-wf5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-wf5.cwl

Branch/Commit ID: 250e6849c8c1dc3ae15f11ae1355ef3486f87263
workflow graph revsort_step_bad_schema.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort_step_bad_schema.cwl

Branch/Commit ID: 9cda157cb4380e9d30dec29f0452c56d0c10d064
workflow graph germline-gpu-v4.1.0.cwl

https://github.com/NCGM-genome/WGSpipeline.git

Path: Workflows/germline-gpu-v4.1.0.cwl

Branch/Commit ID: b8262067df44ce67268f8af00a043f2187c604bb
workflow graph ribosomal_cleanup

This workflow detect and remove ribosomal from a DNA fasta file

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/ribosomal-cleanup.cwl

Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925
workflow graph scatter-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatter-wf4.cwl

Branch/Commit ID: 250e6849c8c1dc3ae15f11ae1355ef3486f87263

Packed ID: main