Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	rnaseq-alignment-circRNA-multiple-samples This workflow aligns multiple samples using STAR for paired-end samples to be used in circRNA pipeline	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/star-alignment-circRNA-multiple-samples-default.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925
	grep-wc-wf.cwl	https://github.com/burmist-git/076_cwl.git Path: grep-wc-wf.cwl Branch/Commit ID: a9d49ac23a6e14f475e277ef11f54f40124ab1ef
	ldv_linc_calibrator.cwl	https://git.astron.nl/RD/LINC.git Path: workflows/ldv_linc_calibrator.cwl Branch/Commit ID: 731c1da202f50b9bc2b54362d2077966b1e878bb
	HBA_target.cwl	https://git.astron.nl/eosc/prefactor3-cwl.git Path: workflows/HBA_target.cwl Branch/Commit ID: 08d75f9f3640d570a9767c33e84ebbc12547207e
	idr.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/idr.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 2c4c3c5e30e751f4793a5b015bbc5960ef6b03da
	trim-rnaseq-se.cwl Runs RNA-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-se.cwl Branch/Commit ID: 0d919fc3a2f4e4c105142df04d74ac934e3c8c03
	Prepare user input Prepare user input for NCBI-PGAP pipeline	https://github.com/ncbi/pgap.git Path: prepare_user_input2.cwl Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 933a0b7554e4ae76a86d25c76b408b5dfc8ed1e3
	gsmcal.cwl	https://git.astron.nl/RD/LINC.git Path: workflows/linc_target/gsmcal.cwl Branch/Commit ID: 1e91001f761abbddeb2c9f4528ed4cec41d113f3