Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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map-ordering-v1_0.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/map-ordering-v1_0.cwl Branch/Commit ID: ed26684328ca370c247f549166f3edcb14a2f9e0 |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 60d8a9e6c5f571ec9b37f10290a1f4613013f3e1 |
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dp3_prep_targ.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target/dp3_prep_targ.cwl Branch/Commit ID: 1e91001f761abbddeb2c9f4528ed4cec41d113f3 |
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run-one.cwl
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https://github.com/hubmapconsortium/hra-workflows.git
Path: steps/run-one.cwl Branch/Commit ID: 93d9e9cd524e2e500707c395074218d73665c303 |
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linc_calibrator.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_calibrator.cwl Branch/Commit ID: 9ead9ff182f8233ffd908f72aa3b3ff516aefd9d |
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revsort.cwl
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https://github.com/ResearchObject/runcrate.git
Path: cwl/revsortlcase/revsort.cwl Branch/Commit ID: 02346ac55e59dfd70ad6371ecb009c215e91cb25 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_orf_hmms.cwl Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3 |
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STAR-Alignment-PE-circRNA
This workflow aligns the fastq files using STAR for paired-end samples to be used in circRNA pipeline |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Alignments/star-alignment-circRNA.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925 |
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vecscreen.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/vecscreen.cwl Branch/Commit ID: 8c21035bff3cbffccf5682bd0357a6d71f3bdb81 |
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mixed_library_metrics.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/mixed_library_metrics.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1 |
