Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph scatter-wf1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-wf1.cwl

Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37
workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_vcf.cwl

Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2
workflow graph fail-unconnected.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/fail-unconnected.cwl

Branch/Commit ID: master
workflow graph gatk4W-copy-new.cwl

Author: AMBARISH KUMAR er.ambarish@gmail.com & ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using GATK4. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence.

https://github.com/ambarishK/bio-cwl-tools.git

Path: gatk4W-copy-new.cwl

Branch/Commit ID: 690ff2fa1ef356c42003e4b9986d39f4e44806a8
workflow graph preprocess.cwl

https://github.com/epigenomics-screw/screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: scatter
workflow graph step_valuefrom5_wf_v1_0.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step_valuefrom5_wf_v1_0.cwl

Branch/Commit ID: main
workflow graph step-valuefrom-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/step-valuefrom-wf.cwl

Branch/Commit ID: main
workflow graph Runs InterProScan on batches of sequences to retrieve functional annotations.

https://github.com/stain/workflow-is-cwl.git

Path: workflows/InterProScan-v5-chunked-wf.cwl

Branch/Commit ID: avoid-spaces
workflow graph star2pass.rnaseq_harmonization.cwl

https://github.com/NCI-GDC/gdc-rnaseq-cwl.git

Path: rnaseq-star-align/star2pass.rnaseq_harmonization.cwl

Branch/Commit ID: master
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 56dafa4