Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 930a2cf

workflow graph collect_pair_files.cwl

https://github.com/mskcc/roslin-cwl.git

Path: modules/pair/collect_pair_files.cwl

Branch/Commit ID: master

workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: 1.0.0

workflow graph A workflow that aligns a fasta file and provides statistics on the SAM file

A workflow that aligns a fasta file and provides statistics on the SAM file

https://github.com/svonworl/multi-step-cwl.git

Path: version_1_2/sub_workflow_align_and_metrics.cwl

Branch/Commit ID: develop

workflow graph Immunotherapy Workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/immuno.cwl

Branch/Commit ID: low-vaf

workflow graph pindel parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel.cwl

Branch/Commit ID: master

workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/ICGC-TCGA-PanCancer/pcawg-oxog-filter.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 1.0.0

workflow graph An example tool demonstrating workflows.

Note that this is an example and the metadata is not necessarily consistent.

https://github.com/eritema/cwlExamples.git

Path: Example15/ex15.cwl

Branch/Commit ID: master

workflow graph count-lines11-extra-step-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines11-extra-step-wf.cwl

Branch/Commit ID: main

workflow graph collate_unique_SSU_headers.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 9c57dba