Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Chipseq alignment with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq_alignment.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00
	chipseq-pe.cwl Runs ChIP-Seq BioWardrobe basic analysis with paired-end input data files.	https://github.com/Barski-lab/workflows.git Path: workflows/chipseq-pe.cwl Branch/Commit ID: dc4ee45ed2c5c30e9a1a173c9ea4445f27d3788a
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: f5a467a21b8f69aef5666fb7bbf35efd98c0cbea
	varscan somatic workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 25aa4788dd4efb1cc8ed6f609cb7803896e4d28d
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
	echo-wf-default.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: 4a31f2a1c1163492ae37bbc748a299e8318c462c
	trick_revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/trick_revsort.cwl Branch/Commit ID: 6d8c2a41e2c524e8d746020cc91711ecc3418a23
	kmer_top_n_extract	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: a33936cca222084cf68e00076255359688b6708a