Explore Workflows

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/revsort.cwl

Branch/Commit ID: main

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/linc_calibrator.cwl

Branch/Commit ID: 7b6185e2e6f9d36b1987274e82842c82ba6f8342

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step_valuefrom5_wf_with_id_v1_0.cwl

Branch/Commit ID: 6a46105708870aa3cf97c8ba91884272b2857975

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR_female.cwl

Branch/Commit ID: master

This workflow detect and remove contamination from a DNA fasta file

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-contaminant-cleanup.cwl

Branch/Commit ID: master

https://github.com/pvanheus/lukasa.git

Path: make_search_pair_workflow.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 135976d

ATAC-seq 04 quantification - PE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/04-peakcall-pe.cwl

Branch/Commit ID: master

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/icgc-tcga-pancancer/pcawg-minibam.git

Path: pcawg_minibam_wf.cwl

Branch/Commit ID: master

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/subworkflows/call_variants.cwl

Branch/Commit ID: master