Explore Workflows
View already parsed workflows here or click here to add your own
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collate_unique_SSU_headers.cwl
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![]() Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 5dc7c5c |
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if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl
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![]() Path: cwls/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl Branch/Commit ID: 0.5.0 |
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bwa_index
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![]() Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_index.cwl Branch/Commit ID: master |
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LHCb MC workflow
This workflow is composed of 2 main steps that should generate 2 types of jobs: * MCSimulation (CommandLineTool): Gauss execution * MCReconstruction (Workflow): Boole, Moore, Brunel and DaVinci executions based on Gauss outputs |
![]() Path: test/workflows/lhcb/description.cwl Branch/Commit ID: main |
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tRNA_selection.cwl
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![]() Path: tools/tRNA_selection.cwl Branch/Commit ID: fa86fce |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
![]() Path: zip_and_index_vcf.cwl Branch/Commit ID: develop |
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pipeline-se.cwl
DNase-seq pipeline - reads: SE |
![]() Path: v1.0/DNase-seq_pipeline/pipeline-se.cwl Branch/Commit ID: master |
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Sort and merge input bed file and generate a .sorted.merged.bed file
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![]() Path: sort_merge.cwl Branch/Commit ID: main |
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sidearm.cwl
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![]() Path: cwl/tools/sidearm.cwl Branch/Commit ID: master |
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plant2human main workflow
\" plant2human main workflow: compare structural similarity and sequence similarity Compare distantly related species, such as plants and humans, using measures of structural similarity and sequence similarity. This workflow will contribute to the discovery of protein-coding genes with features that are “sequence dissimilar but structurally similar”. \" |
![]() Path: Workflow/plant2human.cwl Branch/Commit ID: main |