Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf-variantcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: SGDP-recall-CGC/SGDP-recall-cgc/wf-variantcall.cwl

Branch/Commit ID: 9606af30d5f047745a1cd7ec1a59d65508ed256e
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/revsort.cwl

Branch/Commit ID: 4a31f2a1c1163492ae37bbc748a299e8318c462c
workflow graph wgs alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/tumor_only_wgs.cwl

Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f
workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_nonhuman.cwl

Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: salmon-rnaseq/steps/salmon-quantification.cwl

Branch/Commit ID: 14985c972d540929cacbdf33925af2d4c6c9edb1
workflow graph HelloWorld-pipeline-020.cwl#hello_pipeline

https://github.com/ILIAD-ocean-twin/application_package.git

Path: HelloWorld/files/HelloWorld-pipeline-020.cwl

Branch/Commit ID: c7009260d3d659b77148dff5cd79b71d0e01ff41

Packed ID: hello_pipeline
workflow graph scatter-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatter-wf4.cwl

Branch/Commit ID: f94719e862f86cc88600caf3628faba6c0d05042

Packed ID: main
workflow graph Chipseq alignment with qc and creating homer tag directory

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/chipseq_alignment.cwl

Branch/Commit ID: 735be84cdea041fcc8bd8cbe5728b29ca3586a21
workflow graph phase VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/phase_vcf.cwl

Branch/Commit ID: ec45fad68ca10fb64d5c58e704991b146dc31d28
workflow graph gathered exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/gathered_somatic_exome.cwl

Branch/Commit ID: f21b6c6f70f01d0fe08193684060161107f0bf59