Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 93656ed6582073e434eab168c610625a835dce37
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a
	ani_top_n	https://github.com/ncbi/pgap.git Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: be32f1363f9a9a9247d738e9593b207e9c5172c8
	assemble.cwl Assemble a set of reads using SKESA	https://github.com/ncbi/pgap.git Path: assemble.cwl Branch/Commit ID: 54c5074587af001a44eccb4762a4cb25fa24cb3e
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: e0b3c76e38630fb6234414b5adebfb6a4fb23117
	rnaseq-pe-dutp.cwl Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-pe-dutp.cwl Branch/Commit ID: dc4ee45ed2c5c30e9a1a173c9ea4445f27d3788a
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 24e5290aec441665c6976ee3ee8ae3574c49c6b5
	scatter-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: 203797516329f7fb8aa5e763e6f9b331c63c3060
	gathered exome alignment and somatic variant detection for cle purpose	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_cle_somatic_exome.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f
	03-map-pe-umis.cwl STARR-seq 03 mapping - reads: PE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/STARR-seq_pipeline/03-map-pe-umis.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318