Workflow: GeneFusions workflow with Pizzly (https://github.com/pmelsted/pizzly)
Fetched 2023-01-13 16:14:14 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| Gtf | File | ||
| Kmer | Integer | ||
| Reference | File | ||
| PizzlyInputFile | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| Pizzly |
https://gitlab.com/iidsgt/biocwl/raw/master/Tools/Pizzly.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| Fusion_json | File | ||
| Fusion_fasta | File |
Permalink:
https://w3id.org/cwl/view/git/bca405b31c2413210946e2b7c8773ccc80fc2cf8/Workflows_Release/GeneFusions-Workflow.cwl
