Workflow: cnv_codex
Fetched 2023-01-09 18:01:20 GMT
Verified with cwltool version 3.1.20221201130942
CNV CODEX2 calling
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| bed | File | ||
| bams | File[] | ||
| max_len | String | ||
| min_len | String | ||
| samples | File | ||
| chromosome | String | ||
| min_lratio | String | ||
| codex_active | Boolean |
activate CODEX's tool |
Steps
There are no steps in this workflow
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output | File |
Permalink:
https://w3id.org/cwl/view/git/c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a/structuralvariants/subworkflows/cnv_codex.cwl
