Workflow: samtools_view_sam2bam
Fetched 2023-01-08 22:00:32 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
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- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| paired | File[] | ||
| threads | Integer (Optional) | ||
| unpaired_R1 | File[] | ||
| unpaired_R2 | File[] |
Steps
There are no steps in this workflow
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output_paired | File[] | ||
| output_unpairedR1 | File[] | ||
| output_unpairedR2 | File[] |
Permalink:
https://w3id.org/cwl/view/git/94bcf49c6f22055a359336d2e593f8289f1c5e48/structuralvariants/cwl/subworkflows/samtools_view_sam2bam.cwl
