Workflow: cnv_gridss
Fetched 2023-01-09 10:43:09 GMT
Verified with cwltool version 3.1.20221201130942
CNV GRIDSS calling
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| bams | File[] | ||
| min_q | String | ||
| max_len | String | ||
| min_len | String | ||
| samples | File | ||
| threads | Integer (Optional) | ||
| blacklist | File (Optional) | ||
| enable_gridss | Boolean | ||
| reference_genome | File |
Steps
There are no steps in this workflow
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output | File (Optional) |
Permalink:
https://w3id.org/cwl/view/git/26ae4914651d5b3e188028d1e9d88a391b3f6730/structuralvariants/cwl/subworkflows/cnv_gridss.cwl
