Workflow: collect_bam_stats_workflow.cwl
Fetched 2023-01-11 00:41:46 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
MIT License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| bam_file | File[] | ||
| sample_name | String[] | ||
| output_prefix | String |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| get_bam_info |
get_bam_info.cwl
(CommandLineTool)
|
||
| merge_bam_info_files |
merge_bam_info.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| merged_bam_info_file | File |
Permalink:
https://w3id.org/cwl/view/git/d3200b13b5e17f39128cae27a5a1a62964136897/cwl/collect_bam_stats_workflow.cwl
