Workflow: test_samtools.cwl
Fetched 2023-01-11 06:14:53 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| sam | File | ||
| threads | Integer | ||
| outprefix | String |
Any string that can distinguish sample. |
|
| reference | File |
FASTA file for reference genome |
Steps
There are no steps in this workflow
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| vcf | File | ||
| sorted_bam | File |
Permalink:
https://w3id.org/cwl/view/git/356c47bb87dbcd9a9cb565f147b0dad298dea6cb/workflows/test_samtools.cwl
