Workflow: platanusB-default.cwl
Fetched 2025-04-30 13:49:18 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| fastq1 | File | ||
| fastq2 | File | ||
| prefix | String | ||
| threads | Integer |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| stats |
../tool/seqkit/seqkit-stats-FASTA.cwl
(CommandLineTool)
|
||
| iterate |
../tool/platanus_b/platanusB_iterate.cwl
(CommandLineTool)
|
||
| assemble |
../tool/platanus_b/platanusB_assemble.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| stats | File | ||
| contig | File | ||
| kmerfreq | File | ||
| scaffold | File |
Permalink:
https://w3id.org/cwl/view/git/e316f37f502005165ebd7f22b5257900c7c712ac/cwl/workflow/platanusB-default.cwl
