Workflow: platanusB-default.cwl
Fetched 2025-01-11 20:37:43 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| fastq1 | File | ||
| fastq2 | File | ||
| prefix | String | ||
| threads | Integer |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| stats |
../tool/seqkit/seqkit-stats-FASTA.cwl
(CommandLineTool)
|
||
| iterate |
../tool/platanus_b/platanusB_iterate.cwl
(CommandLineTool)
|
||
| assemble |
../tool/platanus_b/platanusB_assemble.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| stats | File | ||
| contig | File | ||
| kmerfreq | File | ||
| scaffold | File |
Permalink:
https://w3id.org/cwl/view/git/d0d36f70eb62164d57c1ba27a6b63bee7d41e370/cwl/workflow/platanusB-default.cwl
