Workflow: annotation.cwl
Fetched 2023-01-10 12:56:14 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| genome | File | ||
| num_cpu | Integer | ||
| merged_genome | String | ||
| repeat_contig | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| annotation |
../tool/dfast/dfast.cwl
(CommandLineTool)
|
||
| merge_assembly |
../tool/dfast-utility/merge_assembly.cwl
(CommandLineTool)
|
||
| rna_annotation_base |
../tool/dfast/dfast_rrna.cwl
(CommandLineTool)
|
||
| rna_annotation_repeat |
../tool/dfast/dfast_rrna.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| dfast_result | Directory | ||
| merged_genome_result | File |
Permalink:
https://w3id.org/cwl/view/git/6472a8e0e9b13eaf21177cc2c2886f0c303e0e16/cwl/workflow/annotation.cwl
