Workflow: atac_encode_sample.cwl

Fetched 2022-08-09 19:47:15 GMT
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Inputs

ID Type Title Doc
home String
config File
sample https://w3id.org/cwl/view/git/f618ae02c567a8c6585680a0ce4e05f2afb978e7/python/lib/MICGENT/data/cwl/replicated_reads.yaml#sample_replicated_reads
threads Integer (Optional)
bds_home String

Steps

ID Runs Label Doc
atac_encode
atac_encode.cwl (CommandLineTool)
atac_encode
cat_files1_1
cat_files.cwl (CommandLineTool)

Concatenate several files together. This currently uses Unix `cat` utility, and should work correctly on gzip files.

cat_files1_2
cat_files.cwl (CommandLineTool)

Concatenate several files together. This currently uses Unix `cat` utility, and should work correctly on gzip files.

cat_files2_1
cat_files.cwl (CommandLineTool)

Concatenate several files together. This currently uses Unix `cat` utility, and should work correctly on gzip files.

cat_files2_2
cat_files.cwl (CommandLineTool)

Concatenate several files together. This currently uses Unix `cat` utility, and should work correctly on gzip files.

Outputs

ID Type Label Doc
SampleID String
out_json File
out_archive File
Permalink: https://w3id.org/cwl/view/git/f618ae02c567a8c6585680a0ce4e05f2afb978e7/python/lib/MICGENT/data/cwl/atac_encode_sample.cwl