Workflow: conditional_bamindex.cwl

Fetched 2019-01-19 00:26:18 GMT
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Inputs

ID Type Title Doc
thread_count Long
bam File

Steps

ID Runs Label Doc
format_sqlite
../../tools/emit_file_format.cwl (ExpressionTool)
samtools_index
../../tools/samtools_index.cwl (CommandLineTool)
empty_sqlite
../../tools/touch.cwl (CommandLineTool)

Outputs

ID Type Label Doc
output File
sqlite File
Permalink: https://w3id.org/cwl/view/git/0c1a40ea1efb1656644ccec0b7abe659539340e7/workflows/bamfastq_align/conditional_bamindex.cwl