Workflow: readgroup_fastq_pe.cwl
Fetched 2023-01-12 09:06:44 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| forward_fastq | File | ||
| reverse_fastq | File | ||
| readgroup_json | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| emit_readgroup_fastq_pe |
../../tools/emit_readgroup_fastq_pe_file.cwl
(ExpressionTool)
|
||
| emit_json_readgroup_meta |
../../tools/emit_json_readgroup_meta.cwl
(ExpressionTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output | https://w3id.org/cwl/view/git/6698fbd8d0a6155d2008d4e89ab1110fbef9ebbf/tools/readgroup.yml#readgroup_fastq_pe_file |
Permalink:
https://w3id.org/cwl/view/git/6698fbd8d0a6155d2008d4e89ab1110fbef9ebbf/workflows/bamfastq_align/readgroup_fastq_pe.cwl
