Workflow: integrity.cwl

Fetched 2021-01-14 04:59:02 GMT
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Inputs

ID Type Title Doc
bai File
bam File
job_uuid String
input_state String

Steps

ID Runs Label Doc
bai_ls_l
../../tools/ls_l.cwl (CommandLineTool)
bam_ls_l
../../tools/ls_l.cwl (CommandLineTool)
bai_md5sum
../../tools/md5sum.cwl (CommandLineTool)
bai_sha256
../../tools/sha256sum.cwl (CommandLineTool)
bam_md5sum
../../tools/md5sum.cwl (CommandLineTool)
bam_sha256
../../tools/sha256sum.cwl (CommandLineTool)
merge_sqlite
../../tools/merge_sqlite.cwl (CommandLineTool)
bai_integrity_to_db
../../tools/integrity_to_sqlite.cwl (CommandLineTool)
bam_integrity_to_db
../../tools/integrity_to_sqlite.cwl (CommandLineTool)

Outputs

ID Type Label Doc
sqlite File
Permalink: https://w3id.org/cwl/view/git/0c1a40ea1efb1656644ccec0b7abe659539340e7/workflows/bamfastq_align/integrity.cwl