Workflow: wf_makeblastdb.cwl
Fetched 2023-01-12 03:37:51 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pipelines/85bd1acfc587e6a3ebce7ccf1ce93bf8b48e881c/LICENSE
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| fasta | File | ||
| gff_check_dummy | File (Optional) | ||
| fasta_check_dummy | File (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
wf_makeblastdb.cwl#mkdir/d26bd8b1-2a1c-48cd-bc1b-a19330dd9efd
(CommandLineTool)
|
||
| makeblastdb |
wf_makeblastdb.cwl#makeblastdb/86957890-6ffa-43ed-9ae4-a83f5d182fa0
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/85bd1acfc587e6a3ebce7ccf1ce93bf8b48e881c/amr_finder/wf_makeblastdb.cwl
