Workflow: wf_makeblastdb.cwl
Fetched 2023-01-12 06:31:42 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pipelines/7a5fae087e42ec7d2bfdf3f88ba2ea1e8fdc9ddf/LICENSE
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| fasta | File | ||
| gff_check_dummy | File (Optional) | ||
| fasta_check_dummy | File (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
wf_makeblastdb.cwl#mkdir/5eba5576-aa32-4966-b6d8-68e8cff40bc9
(CommandLineTool)
|
||
| makeblastdb |
wf_makeblastdb.cwl#makeblastdb/7e944b3a-817b-4a3c-a621-5bf0dcf82c1e
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/7a5fae087e42ec7d2bfdf3f88ba2ea1e8fdc9ddf/amr_finder/wf_makeblastdb.cwl
