Workflow: bacterial_orthology_cond

Fetched 2025-02-18 07:06:37 GMT
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Inputs

ID Type Title Doc
input File
taxid Integer
blastdb String[]
gc_cache File
taxon_db File
asn_cache Directory[]
genus_list Integer[]
gencoll_asn File
naming_sqlite File
blast_hits_cache File (Optional)
scatter_gather_nchunks String

Steps

ID Runs Label Doc
bacterial_orthology bacterial_orthology
get_prokaryotic_assembly_for_orthology
../progs/get_orthologous_assembly.cwl (CommandLineTool)
get_orthologous_assembly

Outputs

ID Type Label Doc
output File
Permalink: https://w3id.org/cwl/view/git/5b498b4c4f17bb8f17e6886aa4c5661d7aba34fc/bacterial_orthology/wf_bacterial_orthology_conditional.cwl