Workflow: protein_extract
Fetched 2025-08-21 21:01:03 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/efe2b9b032560e00269e06668b3aca56936ec291/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/686ffc8d-0b96-48ae-b9b2-d86bede1ddfc
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/1d7493f5-ce0a-45a0-b00c-860b9a1261f4
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/efe2b9b032560e00269e06668b3aca56936ec291/progs/protein_extract.cwl
