Workflow: gp_makeblastdb
Fetched 2025-09-06 18:31:44 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/e2832ecc1c5f64a9e522bb1b24cd45f8bb2ca429/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| ids | File (Optional) | ||
| asnb | File (Optional) | ||
| asnt | File (Optional) | ||
| lds2 | File (Optional) | ||
| fasta | File (Optional) | ||
| title | String | ||
| dbtype | String | ||
| hardmask | File (Optional) | ||
| softmask | File (Optional) | ||
| asn_cache | Directory[] | ||
| molecules | File (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
e537057c3c1ed9ca7957f85045b5012a
(CommandLineTool)
|
||
| actual |
65e3262b199c1c2cfcc980dd3ddd6034
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/e2832ecc1c5f64a9e522bb1b24cd45f8bb2ca429/progs/gp_makeblastdb.cwl
