- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/d1dbdb71edf26840e0dceea60396bbfc65f56508/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
asn_cache | Directory | ||
db_gencode | Integer | ||
compartments | File | ||
uniColl_asn_cache | Directory |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
gpx_dump |
gpx_qdump.cwl
(CommandLineTool)
|
Seed Search Compartments, gather | |
gpx_qsubmit |
gpx_qsubmit.cwl
(CommandLineTool)
|
Seed Search Compartments, scatter | |
tblastn_wnode |
tblastn_wnode.cwl
(CommandLineTool)
|
Seed Search Compartments, execute\" |
Outputs
ID | Type | Label | Doc |
---|---|---|---|
blast_align | File |
Permalink:
https://w3id.org/cwl/view/git/d1dbdb71edf26840e0dceea60396bbfc65f56508/protein_alignment/wf_seed.cwl