Workflow: protein_extract
Fetched 2026-06-14 09:35:05 GMT
Verified with cwltool version 3.1.20230201224320
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/b548dc1ec6cb90d14d57a813fb69430adaa1c425/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/571aa7eb-841d-4c63-9fd2-32c19b5e3ee3
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/22d7c8b6-9f1c-4720-a9d8-a40dd1a7b1be
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/b548dc1ec6cb90d14d57a813fb69430adaa1c425/progs/protein_extract.cwl
