Workflow: taxonomy_check_16S
Fetched 2023-01-04 17:39:08 GMT
Verified with cwltool version 3.1.20221201130942
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/b38b0070edf910984f29a4a495b5dfa525b8b305/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| align | File | ||
| blastdb | String | ||
| taxon_db | File | ||
| asn_cache | Directory | ||
| blastdb_dir | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| taxonomy_check_16S |
../progs/taxonomy_check_16S.cwl
(CommandLineTool)
|
taxonomy_check_16S |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| report | File |
Permalink:
https://w3id.org/cwl/view/git/b38b0070edf910984f29a4a495b5dfa525b8b305/task_types/tt_taxonomy_check_16S.cwl
