Workflow: gp_makeblastdb
Fetched 2025-01-30 11:29:05 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/9abcceb95c8dcb74b98d7eeda265d8f3a9a4329e/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| ids | File (Optional) | ||
| asnb | File (Optional) | ||
| asnt | File (Optional) | ||
| fasta | File (Optional) | ||
| title | String | ||
| dbtype | String | ||
| hardmask | File (Optional) | ||
| softmask | File (Optional) | ||
| asn_cache | Directory[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
gp_makeblastdb.cwl#mkdir/db75d0e9-f7e2-4732-8f57-7c2c3697299f
(CommandLineTool)
|
||
| actual |
gp_makeblastdb.cwl#actual/cee89102-15f3-4f4a-9a50-07a0702f6099
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/9abcceb95c8dcb74b98d7eeda265d8f3a9a4329e/progs/gp_makeblastdb.cwl
