- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/9362082213e20315f76f6f5c235cac3aae565747/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
asn_cache | Directory | ||
seed_hits | File | ||
gc_assembly | File | ||
uniColl_asn_cache | Directory |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
Find_ProSplign_Alignments_gpx_qdump |
gpx_qdump_pro.cwl
(CommandLineTool)
|
Find ProSplign Alignments, gather | |
Find_ProSplign_Alignments_gpx_qsubmit |
gpx_qsubmit_pro.cwl
(CommandLineTool)
|
Find ProSplign Alignments, scatter | |
Filter_Protein_Seeds_prosplign_compart |
prosplign_compart.cwl
(CommandLineTool)
|
Filter Protein Seeds, compart | |
Find_ProSplign_Alignments_prosplign_wnode |
prosplign_wnode.cwl
(CommandLineTool)
|
Seed Search Compartments, execute\" | |
Filter_Protein_Seeds_prosplign_compart_filter |
prosplign_compart_filter.cwl
(CommandLineTool)
|
Filter Protein Seeds, compart filter |
Outputs
ID | Type | Label | Doc |
---|---|---|---|
prosplign_align | File |
Permalink:
https://w3id.org/cwl/view/git/9362082213e20315f76f6f5c235cac3aae565747/protein_alignment/wf_compart_filter_prosplign.cwl