Workflow: Filter Protein Alignments
Fetched 2023-01-10 16:30:45 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/7cee09fb3e33c851e4e1dfc965c558b82290a785/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| asn_cache | Directory | ||
| prosplign | File | ||
| blast_full | File | ||
| uniColl_asn_cache | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| cat |
cat.cwl
(CommandLineTool)
|
file concatenation | |
| align_filter |
align_filter.cwl
(CommandLineTool)
|
Filter Protein Alignments |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| align | File | ||
| align_non_match | File |
Permalink:
https://w3id.org/cwl/view/git/7cee09fb3e33c851e4e1dfc965c558b82290a785/protein_alignment/wf_align_filter.cwl
