Workflow: protein_extract
Fetched 2026-06-22 12:15:49 GMT
Verified with cwltool version 3.1.20230201224320
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/68311dd5328bf6b782a370a0253b41062a3359a3/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| it | Boolean (Optional) | ||
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
2b6f4d47b08e72247172fd214881e53b
(CommandLineTool)
|
||
| protein_extract |
5b8292e1f68967fd7175a23f2431bcaa
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/68311dd5328bf6b782a370a0253b41062a3359a3/progs/protein_extract.cwl
