Workflow: protein_extract
Fetched 2025-08-25 22:44:22 GMT
Verified with cwltool version 3.1.20230201224320
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/5d5c4b4ed6d6de42eda2c68aefcf738c201517fb/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| it | Boolean (Optional) | ||
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
1ccb6fddcfd63a1f592edf620523627b
(CommandLineTool)
|
||
| protein_extract |
dcf26b9a8e7eaf42ff43b83e2da55339
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/5d5c4b4ed6d6de42eda2c68aefcf738c201517fb/progs/protein_extract.cwl
