Workflow: gp_makeblastdb
Fetched 2025-09-02 12:26:52 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Requires:
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/550682d2fe3348161eab1b8612e48a59af4ac6a5/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| ids | File (Optional) | ||
| asnb | File (Optional) | ||
| asnt | File (Optional) | ||
| fasta | File (Optional) | ||
| title | String | ||
| dbtype | String | ||
| hardmask | File (Optional) | ||
| softmask | File (Optional) | ||
| asn_cache | Directory[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
gp_makeblastdb.cwl#mkdir/28fe489b-4280-45f8-bfc2-b6a2ef478ddf
(CommandLineTool)
|
||
| actual |
gp_makeblastdb.cwl#actual/f2360da5-3754-4aef-87db-1909cd3f141e
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/550682d2fe3348161eab1b8612e48a59af4ac6a5/progs/gp_makeblastdb.cwl
