Workflow: protein_extract
Fetched 2026-08-06 20:25:30 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/50d161364e2859ed5c95ef07c9f7234f1431cf31/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/18885a87-93f1-4f58-8a77-4a460e1f7340
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/ba7322c3-90e8-41c7-b8c2-9cd604353892
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/50d161364e2859ed5c95ef07c9f7234f1431cf31/progs/protein_extract.cwl
