Workflow: protein_extract
Fetched 2023-01-13 18:59:41 GMT
Verified with cwltool version 3.1.20221201130942
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/e8c8ae9f-99ae-44c5-801c-4f2c6872d534
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/214c3667-3b79-4f6d-a1c6-d3e61d271440
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b/progs/protein_extract.cwl
