Workflow: gp_makeblastdb
Fetched 2023-01-13 18:15:50 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| ids | File (Optional) | ||
| asnb | File (Optional) | ||
| asnt | File (Optional) | ||
| fasta | File (Optional) | ||
| title | String | ||
| dbtype | String | ||
| hardmask | File (Optional) | ||
| softmask | File (Optional) | ||
| asn_cache | Directory[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
gp_makeblastdb.cwl#mkdir/dd9a7259-bc6e-4f22-a702-a144827b1300
(CommandLineTool)
|
||
| actual |
gp_makeblastdb.cwl#actual/0e7f3c87-2087-498b-860f-0e1cc1d6fb0e
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b/progs/gp_makeblastdb.cwl
