- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/369afa7090a7480e6a0b144eff967a4a52b6fde2/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
filter | String (Optional) | ||
blastdb | String | ||
compart | Boolean | ||
collated | Boolean | ||
asn_cache | Directory | ||
fill_gaps | Boolean | ||
blast_align | File | ||
blastdb_dir | Directory | ||
max_discontinuity | Integer (Optional) | ||
allow_intersection | Boolean | ||
top_compartment_only | Boolean |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
align_merge |
../progs/align_merge.cwl
(CommandLineTool)
|
align_merge |
Outputs
ID | Type | Label | Doc |
---|---|---|---|
align | File |
Permalink:
https://w3id.org/cwl/view/git/369afa7090a7480e6a0b144eff967a4a52b6fde2/task_types/tt_align_merge_sas.cwl