Workflow: ani_top_n
Fetched 2023-01-11 12:52:26 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/3384fa5776c183d33bef830696b6edc6ec55a292/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| taxon_db | File | ||
| asn_cache | Directory[] | ||
| tax_synon | File | ||
| ANI_cutoff | File | ||
| blast_align | File | ||
| gencoll_asn | File | ||
| ref_assembly_id | Integer | ||
| ref_gencoll_asn | File | ||
| gcextract2_sqlite | File | ||
| ref_assembly_taxid | Integer |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| ani_top_identification |
../progs/ani_top_identification.cwl
(CommandLineTool)
|
ani_top_identification |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| top | File | ||
| annot | File |
Permalink:
https://w3id.org/cwl/view/git/3384fa5776c183d33bef830696b6edc6ec55a292/task_types/tt_ani_top_n.cwl
