Workflow: Execute CRISPR
Fetched 2023-01-12 15:07:50 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/2c7879b47890b9300ab9b5ebd35e17372e077757/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| seqids | File | ||
| asn_cache | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| Execute_CRISPR_dump |
gpx_qdump.cwl
(CommandLineTool)
|
Execute CRISPR, gather | |
| Execute_CRISPR_wnode |
ncbi_crisper_wnode.cwl
(CommandLineTool)
|
Execute CRISPR, execution | |
| Execute_CRISPR_submit |
gpx_qsubmit.cwl
(CommandLineTool)
|
Execute CRISPR, scatter |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| annots | File |
Permalink:
https://w3id.org/cwl/view/git/2c7879b47890b9300ab9b5ebd35e17372e077757/bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl
