Workflow: gp_makeblastdb
Fetched 2026-06-12 17:34:35 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
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- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/2a81fcde75ca7665814c8de2210c7bc3121a08a3/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| ids | File (Optional) | ||
| asnb | File (Optional) | ||
| asnt | File (Optional) | ||
| lds2 | File (Optional) | ||
| fasta | File (Optional) | ||
| title | String | ||
| dbtype | String | ||
| hardmask | File (Optional) | ||
| softmask | File (Optional) | ||
| asn_cache | Directory[] | ||
| molecules | File (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
28734df3eda03731632c9bd3be788454
(CommandLineTool)
|
||
| actual |
01bf0e19ce707ec97b4cea7c5193481f
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/2a81fcde75ca7665814c8de2210c7bc3121a08a3/progs/gp_makeblastdb.cwl
