- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/1e7aa9f0c34987ddafa35f9b1d2c77d99fafbdab/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
kmer_list | File | ||
dist_method | String | ||
score_method | String | ||
ref_kmer_list | File | ||
kmer_cache_sqlite | File | ||
minhash_signature | String |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
gpx_make_outputs |
../progs/gpx_make_outputs.cwl
(CommandLineTool)
|
gpx_make_outputs | |
kmer_compare_wnode |
../progs/kmer_compare_wnode.cwl
(CommandLineTool)
|
kmer_compare_wnode | |
submit_kmer_compare |
../progs/submit_kmer_compare.cwl
(CommandLineTool)
|
submit_kmer_compare |
Outputs
ID | Type | Label | Doc |
---|---|---|---|
outdir | Directory |
we hope to use this to pass instead of file list |
|
distances | File |
Permalink:
https://w3id.org/cwl/view/git/1e7aa9f0c34987ddafa35f9b1d2c77d99fafbdab/task_types/tt_kmer_ref_compare_wnode.cwl