Workflow: protein_extract
Fetched 2023-01-12 04:05:49 GMT
Verified with cwltool version 3.1.20221201130942
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/13b411d94a568e52797ba936732dc65f1a91bd41/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/fbc3f849-4016-42d5-8e0a-30aeb88d028d
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/a072753d-78f6-4bd9-a6c9-8f8a4102b4f5
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/13b411d94a568e52797ba936732dc65f1a91bd41/progs/protein_extract.cwl
