Workflow: run_workflow_234.cwl
Fetched 2024-11-23 18:38:13 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| user_query | File (Optional) | ||
| user_db_dir | Directory (Optional) | ||
| user_search_db | String | ||
| user_search_db_tsv | File (Optional) | ||
| user_workflow_results | String |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| blast_step |
blastn_docker.cwl
(CommandLineTool)
|
Example CWL script to run a BLAST search in docker | |
| outlier_step |
outlier_docker.cwl
(CommandLineTool)
|
||
| assign_taxon_step |
assign_taxon_docker.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blast_out_class | File |
Permalink:
https://w3id.org/cwl/view/git/496b3e2bff8c20d5a7d5c3cbe9b64697767b1c13/outlier-hit-detection-pipeline/run_workflow_234.cwl
